Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922997.1_cds_XP_016471721.1_64023
CDS Infomation

[gene=LOC107793795] [db_xref=GeneID:107793795] [protein=protein ESKIMO 1-like] [protein_id=XP_016471721.1] [location=join(38365..38957,39036..39207,39928..40127,40211..40369,40453..40801)] [gbkey=CDS]
Sequence

ATGCATTCACTCCGCGGCCGAAAAACGCCACTCATTTCCCCTGAATTATTCAACATGAAA
CAGCACAGTGGCCGTAAGAATAATAATCTCTCAATATTCGTAGTCGTTTTCTCCATATTC
CTCTTTGGTTGTTTCATGTACAATGAAGACGTTAAGTCCATTGCAGAATTCCCATTTTCA
ACACCCAAAGCTCAAGAAATCACTGAACAAGAAAATGGGATTCAAGAAAGCAGTGTTTCA
ACTGTGGTTATGAATTCAAGAACTGTAGTTGAAACAGAAACAGAGGCCGTTAGTACTGAA
CAGGAAGTTGTGAATTTGAAGTCTAGTGAAGAAGAGGAAACGGAAACAGAGCAAGAAGAG
CAGAAGATTGAAATGCCAGTTGAAGAAGAAGAAGAAGAGGAGAACATTGAATTGCCACCT
GAGAATTGTGATCTTTTCGTAGGGAATTGGGTATATGATAATGTAACACACCCAATTTAC
AAAGAACATGAATGTGAATTCCTCACTGCTCAAGTTACTTGTTTGAGAAATGGAAGACAA
GATTCTATGTATCAGAATTGGAGGTGGCAACCCAGAGACTGTTCTTTACCCAAGTTTAAA
CCAAGATTGCTGCTTGAGAAACTAAGGAACAAGAGACTCATGTTTGTGGGAGACTCTTTG
AATAGAAATCAATGGGAATCTATGGTTTGTTTGGTTCAATCCGCAGTTCCTTCTGGCCGA
AAAAGCTTAAACAAGACTGGCTCTTTATCTATTTTCAGAATTGAGGATTATAATGCCACA
GTGGAGTTTTACTGGGCCCCATTTCTGGTGGAGTCGAACTCAGATGATCCAAATATGCAT
AGCATCTTGAACAGAATAATCATGCCTGAATCTATTGAAAAGCATGGCAACAACTGGAAG
AATGTGGATTATCTCATCTTCAACACTTACATTTGGTGGATGAACACTTTCAGCATGAAA
ATCCTGCGAGGATCATTCGATGAAGGGGCGACAGAATACGACGAGATAGATAGACCAATA
GCTTATCGGAGAGTTTTGACAACATGGTCTCAATGGGTCGATAACAATATAAATCAAAAT
CGCACCCAAGTTTTCTTCATGAGCATGTCTCCACTTCATATAAAGAGTTTAGATTGGGAA
AATCCTGATGGAATAAAATGTGCTAAAGAGACAACACCAATATTGAACACATCAATGCCA
CTAGATGTTGGAACAGATAAGAGACTGTTTGTGATAGCAGCAAATGTGACTGAATCAATG
AAAATCCCAGTTTATTTTCAAAACATTACAGCATTATCAGAGTACAGAAAAGATGGTCAC
ACATCAGTTTACACAATTCGTCAAGGCAAAATGCTAACACCTGAGCAACAAGCTGATCCT
GCGACCTATGCTGATTGTATCCATTGGTGCCTCCCTGGATTGCCTGACACTTGGAATGAA
TTCCTCTATTCGCGTATTATTTCACGTTCTTGA

Peptide Sequence

PEP ID

XP_016471721.1
PEP Infomation

PREDICTED: protein ESKIMO 1-like [Nicotiana tabacum]
Sequence

MHSLRGRKTPLISPELFNMKQHSGRKNNNLSIFVVVFSIFLFGCFMYNEDVKSIAEFPFS
TPKAQEITEQENGIQESSVSTVVMNSRTVVETETEAVSTEQEVVNLKSSEEEETETEQEE
QKIEMPVEEEEEEENIELPPENCDLFVGNWVYDNVTHPIYKEHECEFLTAQVTCLRNGRQ
DSMYQNWRWQPRDCSLPKFKPRLLLEKLRNKRLMFVGDSLNRNQWESMVCLVQSAVPSGR
KSLNKTGSLSIFRIEDYNATVEFYWAPFLVESNSDDPNMHSILNRIIMPESIEKHGNNWK
NVDYLIFNTYIWWMNTFSMKILRGSFDEGATEYDEIDRPIAYRRVLTTWSQWVDNNINQN
RTQVFFMSMSPLHIKSLDWENPDGIKCAKETTPILNTSMPLDVGTDKRLFVIAANVTESM
KIPVYFQNITALSEYRKDGHTSVYTIRQGKMLTPEQQADPATYADCIHWCLPGLPDTWNE
FLYSRIISRS

Transcript Sequence

Gene sequence data has not been registered.